BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H07SP1|AL428293
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1322 1586 0.0
>3x_Contig1322
Length = 7535
Score = 1586 bits (798), Expect = 0.0
Identities = 809/814 (99%)
Strand = Plus / Plus
Query: 1 atctgatgcactttccacttaattgcatcgatagcctgaggatatttgatataatagtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4689 atctgatgcactttccacttaattgcatcgatagcctgaggatatttgatataatagtag 4748
Query: 61 tatcttttaacactacgtgagtgcacagcaaattcctgctgtgaatgacgagccagaatg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4749 tatcttttaacactacgtgagttcacagcaaattcctgctgtgaatgacgagccagaatg 4808
Query: 121 cgatcttctagaagaaatgtaatgagagaacgtaactccggtctcttgattcctagtaag 180
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4809 cgatcttctagtagaactgtaatgagagaacgtaactccggtctcttgattcctagtaag 4868
Query: 181 tgcgccaaatcctcttctgataacacagaatggaamatgatggcatccaagaccaacaca 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4869 tgcgccaaatcctcttctgataacacagaatggaacatgatggcatccaagaccaacaca 4928
Query: 241 tatgaattcggatagaattgacgaatgacaaaactgagtaacgctttgatggtctcttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4929 tatgaattcggatagaattgacgaatgacaaaactgagtaacgctttgatggtctcttcg 4988
Query: 301 ataggcttgtccatctctgatgttgttcaaagtgtgcagcagtctgtggctttaaatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4989 ataggcttgtccatctctgatgttgttcaaagtgtgcagcagtctgtggctttaaatagt 5048
Query: 361 cggatgttataccacttatttcttaggcagcttcttgatttataagttgaattgatctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5049 cggatgttataccacttatttcttaggcagcttcttgatttataagttgaattgatctgt 5108
Query: 421 atctttattcttttttttttcacactttattcatgtttaaccgagaagaggaatgtagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5109 atctttattcttttttttttcacactttattcatgtttaaccgagaagaggaatgtagag 5168
Query: 481 caaggcctttacaacagatactatctgcatcatgattaagataagggacctaagggtttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5169 caaggcctttacaacagatactatctgcatcatgattaagataagggacctaagggtttt 5228
Query: 541 aataagtattgacataagtatatactgtagtatctagatatcaaagtgttttttttattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5229 aataagtattgacataagtatatactgtagtatctagatatcaaagtgttttttttattt 5288
Query: 601 ctatraggtacaaatacagtttaggaatgcttaaactgagcagttcaaaaaagtattcga 660
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5289 ctataaggtacaaatacagtttaggaatgcttaaactgagcagttcaaaaaagtattcga 5348
Query: 661 ttttgtaaaactttagtgcaactgaatgtggtttagatacgcatttctattttgacggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5349 ttttgtaaaactttagtgcaactgaatgtggtttagatacgcatttctattttgacggaa 5408
Query: 721 tccagtctactctaggtatcgtgttaaggaaacggcactctccttttaagagataagtca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5409 tccagtctactctaggtatcgtgttaaggaaacggcactctccttttaagagataagtca 5468
Query: 781 cgtttcctattgaaacgaataataattagtgatt 814
||||||||||||||||||||||||||||||||||
Sbjct: 5469 cgtttcctattgaaacgaataataattagtgatt 5502
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7545
Number of Sequences: 1807
Number of extensions: 7545
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)